Refereed Journal Articles

Articles

2023

  1. Odigi, F. C.; Eramian, M. G. and Stavness, I. Benchmarking Self-Supervised Contrastive Learning Methods for Image-based Plant Phenotyping. In Plant Phenomics: 18 pages, 2023.
  2. Najafian, K.; Ghanbari, A.; Sabetkish, M. et al. Semi-Self-Supervised Learning for Semantic Segmentation in Images with Dense Patterns. In Plant Phenomics, 2023.

2022

  1. Seidenthal, bf K.; Panjvani, K.; Chandnani, R. et al. Iterative image segmentation of plant roots for high-throughput phenotyping. In Scientific Reports, 12: 16563, 21 pages, 2022.
  2. Mardanisamani$^*$, bf S. and Eramian, bf M. Segmentation of Vegetation and Microplots in Aerial Agriculture Images: A Survey. In The Plant Phenome Journal, 5 (1): e20042, 32 pages, 2022.

2021

  1. Mardanisamani$^*$, bf S.; Ayalew, T. W.; Badhon, M. A. et al. Automatic Microplot Localization using UAV Images and a Hierarchical Image-based Optimization Method. In Plant Phenomics: 16 pages, 2021.

2020

  1. Eramian$^*$, bf M.; Power, C.; Rau, bf S. et al. Benchmarking Human Performance in Semi-automated Image Segmentation. In Interacting with Computers, 32 (3): 233-245, 2020.
  2. Belak, Z.; Pickering, J.; Gillespie, Z. et al. Genes responsive to rapamycin and serum deprivation are clustered on chromosomes and undergo re-organization within local chromatin environments. In Biochemistry and Cell Biology, 98 (2): 178-190, 2020.

2018

  1. Daley, M.; Eramian, bf M.; Power, C. et al. From Helmut J"urgensen's former students: the game of informatics research. In Journal of Automata, Languages, and Combinatorics, 23 (1-3): 127-141, 2018.

2017

  1. Chi, J.; Walia, E.; Babyn, P. et al. Thyroid Nodule Classification in Ultrasound Images by Fine-tuning Deep Convolutional Neural Network. In Journal of Digital Imaging, 30 (4): 477-486, 2017.
  2. Eramian$^*$, bf M.; Walia, E.; Power, C. et al. Image-based Search and Retrieval for Biface Artefacts using Features Capturing Archaeologically Significant Characteristics. In Machine Vision and Applications, 28 (1): 201-218, 2017.
  3. Chi, bf J. and Eramian$^*$, bf M. Enhancement of textural difference using wavelet-based texture characteristics morphological component analysis: A preprocessing method for improving image segmentation. In Computer Vision and Image Understanding, 158 (C): 49-61, 2017.
  4. Power$^*$, C.; Lewis, A.; Petrie, H. et al. Improving Archaeologists' Online Archive Experiences through User-Centered Design. In ACM Journal on Computing and Cultural Heritage, 10 (1): 20 pages, 2017.

2016

  1. Yi, bf X.; Eramian, bf M.; Wang$^*$, R. et al. Seed Identification using Computer Vision -- A proof of Concept Study. In Seed Technology, 37 (1): 93-100, 2016.
  2. Yi, bf X. and Eramian$^*$, bf M. LBP-Based Segmentation of Defocus Blur. In IEEE Transactions on Image Processing, 25 (4): 1626-1638, 2016.

2015

  1. Gillespie, Z. E.; MacKay, K.; Sander, M. et al. Rapamycin reduces fibroblast proliferation without causing quiescence and induces STAT5A/B-mediated cytokine production. In Nucleus, 6 (6): 490-506, 2015.
  2. Chi, bf J. and Eramian$^*$, bf M. Enhancement of Textural Differences based on Morphological Component Analysis. In IEEE Transactions on Image Processing, 24 (9): 2671-2684, 2015.

2014

  1. Frydenlund, bf A.; Eramian$^*$, bf M. and Daley, T. Automatic Classification of Four Types of Developmental Odontogenic Cysts. In Computerized Medical Imaging and Graphics, 38 (3): 151-162, 2014.

2012

  1. Dong, bf M.; Eramian$^*$, bf M. G.; Ludwig, S. et al. Automatic Detection And Segmentation of Bovine Corpora Lutea In Ultrasound Ovarian Images Using Genetic Programming And Rotation Invariant Local Binary Patterns. In Medical and Biological Engineering and Computing, 51 (4): 405-416, 2012.

2011

  1. Eramian$^*$, bf M.; Daley, M.; Neilson, D. et al. Segmentation of Epithelium in H&E Stained Odontogenic Cysts. In Journal of Microscopy, 244 (3): 273-292, 2011.

2009

  1. Rusnell$^*$, bf B.; Mould, D. and Eramian, bf M. Feature-Rich Distance-Based Terrain Synthesis. In The Visual Computer, 25 (5-7): 573-579, 2009.

2008

  1. Daley, M.; Eramian, bf M. and McQuillan$^*$, I. The Bag Automaton: A model of nondeterministic storage. In Journal of Automata, Languages and Combinatorics, 13 (3/4): 185-206, 2008.
  2. Rusnell, bf B. J.; Pierson, R. A.; Singh, J. et al. Level Set Segmentation of Bovine Corpora Lutea in it ex situ Ovarian Ultrasound Images. In Reproductive Biology and Endocrinology, 6 (33), 2008.

2007

  1. Eramian$^*$, bf M. G.; Adams, G. P. and Pierson, R. A. Enhancing Ultrasound Texture Differences for Develpoing an it in vivo ``Virutal Histology'' Approach to Bovine Ovarian Imaging. In Reproduction, Fertility and Development, 19 (8): 910-924, 2007.

2004

  1. Eramian, bf M. G. Efficient Simulation of Nondeterministic Weighted Finite Automata. In Journal of Automata, Languages, and Combinatorics, 9 (2-3): 257-267, 2004.

1999

  1. Eramian, bf M. G.; Schincariol, R. A.; Mansinha, L. et al. Generation of Aquifer Heterogeneity Maps Using Two Dimensional Spectral Texture Segmentation Techniques. In Mathematical Geology, 31 (3): 327-348, 1999.

1997

  1. Mansinha$^*$, L.; Stockwell, R G.; Lowe, R. P. et al. Local S Spectrum Analysis of 1-D and 2-D Data. In Physics of the Earth and Planetary Interiors, 103: 329-336, 1997.